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Running in batch mode
MATLAB (2019a and newer) can also be run in batch mode, I.E non-interactively. This model of execution fits nicely with HPC systems like Viking, where work can be submitted to the scheduler to be executed.
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#!/bin/bash #SBATCH --job-name=matlab_batch_example # Job name #SBATCH --account=PROJECT-ACCOUNT-2020 # Your Viking project account code #SBATCH --partition=nodes # Partition for the job #SBATCH --ntasks=1 # Run a single task #SBATCH --cpus-per-task=1 # Number of cores per task #SBATCH --mem=4800MB # Job memory request #SBATCH --time=00:02:00 # Time limit hrs:min:sec #SBATCH --output=%x.log # Standard output and error log #SBATCH --mail-type=ALL # Events to receive emails about #SBATCH --mail-user=a.user@york.ac.uk # Where to send mail module load math/MATLAB/2018a2021a matlab -batch matlab_batch_example |
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